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I have been searching, without success; for a solution that will support high performance computing clusters. These consists of running 2- many computing clusters, each with multiple gpus.
Would n…
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Hi,
As I really like uv, I've recently started testing it on the academic HPC clusters I regularly use, and would like to share some issues that I found, that makes working with uv harder.
I under…
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### Contact Details
ks164@duke.edu
### Scripts
10a-gwas_aar.sh
### What happened?
Running fastGWA on twin (MZ and DZ) data gives the following error:
Estimating the genetic variance (Vg) by fa…
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https://www.coiled.io/
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When compiling with the Intel compiler and enabling `DEBUG = True`, setting `STOKES_MOST = True` leads to a runtime error:
```
forrtl: severe (408): fort: (3): Subscript #1 of the array IFACEHEIGH…
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#### Problem Description
I was upgrading on premise from HPC Pack 2016 to 2019, but after a successful installation, I cannot connect to the HPC Cluster Manager, because the HPC services are constantl…
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Hi John,
I am trying to run a coupled ROMS-WW3 test case in https://github.com/DOI-USGS/COAWST/tree/main/Projects/Inlet_test/WW3 directory using COAWST 3.8 and got an error message below.
Do …
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Some possibilities:
* Job arrays: https://slurm.schedmd.com/job_array.html (pointed out by @jeromekelleher)
* funcX: https://funcx.org/
* Parsl: https://parsl-project.org/
cc @TomNicholas
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Hi,
I found a problem to execute the `slurm.sbatch` task in ECMWF's hpc-2020 platform. This is the error message that I get:
```
2024-10-21 12:35:13 INFO [se.task:hpc.slurm.sbatch ] Submitting jo…
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Hello,
I am encountering an issue with preprocess. During generation of TF binding, I get an error
```
preprocess(TG_pseudobulk,RE_pseudobulk,GRNdir,genome,method,outdir)
Mapping gene exp…