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Dear all,
I'm running into problems using the gmgc module. Somehow loading the mapping file fails. I downloaded the file manually and placed it in Modules/gmgc/1.0/cached as dumpFile.cgi?i=GMGC10.em…
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Motivation:
```
seq.filter(min_identity_pc=ARGV[1])
```
fails to typecheck since `ARGV[]` are strings.
and similarly:
```
cutoff = 95
...
seq.filter(min_identity_pc=cutoff)
...
write(... …
unode updated
3 years ago
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Parallel module exits with error, if the data are not in the same directory as the script. Running the `parallel.ngl` test exits with error, if data is moved into a subfolder: `sample.fq -> samle/samp…
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My home directory in the HPC has only 5G space. I managed to setup my conda installation directory to my scratch directory which has enough space. I do not have problem with conda installation of ngl…
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I have problems installing ngless with conda on a Mac (MacOS Mojave version 10.14.6)). I have updated to the latest version of conda (4.7.12) and I have installed the Bioconda channel but when I try t…
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Hi,
Any chance that you are considering MACREL release for macOS?
Thanks
Somak
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Originally posted on https://github.com/ngless-toolkit/ngless2018benchmark/issues/2
NGLess `load_mocat_sample` does not ignore empty lines at the end of a fastq.gz file. Not sure if this is a bug o…
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The bionconda recipe for sequenceTools will give another way for people to install it easily. It will also make it easy to incorporate into eager2. The only way to get sequenceTools running in a bioco…
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@luispedro The bioconda recipe for building ngless no longer seems to work:
https://circleci.com/gh/bioconda/bioconda-recipes/45506?utm_campaign=vcs-integration-link&utm_medium=referral&utm_source=gi…
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The console/terminal throws an error when the newly created conda environment _ngless_ is to be activated using the following command:
```bash
source activate ngless
```
The console throws the fol…