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The dataset used in the original paper is in PNG format, but my dataset is in NII format. How can I use my own dataset to run this model?
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This issue summarizes model training on T2w lumbar data with relabeled rootlets using the 3D Slicer `Draw Tube` module.
This is a follow up of https://github.com/ivadomed/model-spinal-rootlets/issu…
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I pushed the data from email `Using sct for Quantitative Analysis of Spinal Cord MRI` received on `December 18, 2021 9:14:47 PM` on the branch `af/add_sub-56027` under `datasets/sct-testing-large`.
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git clone https://github.com/arnaudletroter/7TAMIBrain
-rw-rw---- 1 greve recon 99297 Sep 20 22:05 7TAMI_DGN.nii.gz --> this is ok
-rw-rw---- 1 greve recon 134 Sep 20 22:05 7TAMI_T1w_30.nii.gz…
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your info_label.txt says:
~~~
# Template labels
# Keyword=IndivLabels (Please DO NOT change this line)
# ID, name, file
0, T1-weighted template, templatedog_t1w.nii.gz
1, T2-weighted template,…
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Issue Resolved
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@neurolabusc
Hi,
Years ago I tried nii_sliceTime.m to correct slice timing on multiband data. I'm trying to reproduce that, and running into problems:
```
>> nii_sliceTime('sub-001a.nii')
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Hi there!
I just tried to run the pipeline on a dataset, and encountered an error,
>F0909 18:32:25.907539 1837 im2col.cu:497] Check failed: error == cudaSuccess (209 vs. 0) no kernel image is …
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### What happened?
I'm using fMRIPrep to process HCP-YA data, which includes single band reference (SBRef) images. However, I've noticed that the SBRef images were not utilized during the motion co…
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Hi,
I ran into some problems when running eval_strain_sax.py.
It shows that FileNotFoundError: No such file or no access: '/cine_motion/sa_crop.nii.gz'
I think maybe the following statement did n…