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The API endpoint https://api.geneontology.org/api/ontology/term/NCBITaxon:1 returns _**id: taxon:1**_ instead of _**NCBITaxon:1**_
```json
{
"goid":"taxon:1",
"label":"root",
…
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I'm looking at the example SHACL generation from ontology URLs at https://astrea.linkeddata.es/swagger-ui.html#/generation-api/shapesFromOwlURLUsingPOST.
Running the example query
```json
{
…
jeswr updated
3 months ago
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Here's a detailed plan to develop advanced ontology management capabilities for TxtAI, leveraging Owlready2 and other relevant libraries:
1. Enhance Owlready2 integration for more sophisticated ont…
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Since release 2.4 ([notes](https://doc.jonquetlab.lirmm.fr/share/e6158eda-c109-4385-852c-51a42de9a412/doc/release-notes-btKjZk5tU2)) we need a owl:Ontology object to: (i) automatically extract metadat…
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I think the general consensus in the SSSOM community is that mappings should be moved out of ontologies (hasDbXref) and into external SSSOM files, because (1) it would allow mappings to be updated wit…
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### Issue Name
Standardize Measurement Techniques
### Issue Description
Similar to what we've done for `healthConditions`, `species`, `infectiousAgent`, we need to standardize the ingested values f…
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In addition to the plain JSON responses the API could return the data as JSON-LD. This could be achieved by wrapping the plain responses into an object containing the context. For example, the respons…
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#### Error in sending API response causes Pretzel server to exit
When a Pretzel server is restarted and one of the Pretzel clients of that server sends an API request without refreshing the tab af…
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Provide Web APIs (REST, ideally) to:
- download an ontology
- get the list of available ontologies
- upload an ontology
- replace an ontology
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**What version of EMX2 are you using (see footer)**
8.158.1
**Describe the bug**
When i want want to fetch selected ontology items i can not get the folded tree data
**To Reproduce**
Steps t…