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Hello. I tried using the demo code of Codi (https://github.com/microsoft/i-Code/tree/main/i-Code-V3) to reproduce results on the AudioCaps dataset. However, I was unable to achieve the results reporte…
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Hi Team,
I have successfully finetuned a QLoRA adapter on a custom dataset. When I try to load it in full precision, it gets loaded and works well
But this takes too much time and GPU memory to …
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Hello, may I ask where I can obtain the PDB files mentioned in the paper's datasets?
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I am training tf-faster-rcnn on Caltech pedestrian dataset, and after several steps of training, the log turns to be this:
speed: 0.220s / iter
> /home/zhuxy/tf-faster-rcnn/lib/layer_utils/proposal_…
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Is the way to use OmniBal in the internvl codebase by adding the use_fast_dataset=True configuration in the bash script? For example, if you add the use_fast_dataset=True configuration in this file: h…
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## 🐛 Bug
Standard featurizers like GraphConv and AtomicConvFeaturizer no longer featurize PDB Bind dataset loaded with `load_pdbbind()` or if they do, result in incompatible dataset datatypes with …
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@mmagnus, can you add the following to your repository in rp-ready form?
- https://github.com/RNA-Puzzles/raw_dataset_and_for_assessment/tree/master/normalized/PZ26/pdb
- https://github.com/RNA-Puzz…
tzok updated
12 months ago
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Thank you for this great tool.
I am starting to install it on Ubuntu 20.04, and met with multiple FileNotFound Errors. Are there any dependencies not listed?
Here are the errors:
(base) nc1@nc1-UA9…
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Hi
I am trying to use convert_dataset.py on my simulation. I converted the xtc to pdb containing only CA, having 100,001 MODEL. The number of residues are 489 and I run as follow:
python convert_d…
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I want to predict the protein affinity of two proteins. After training a model, I load two sequences from PDB. However, I have problem in prediction phase.
`
import torch
import torchdrug
fro…