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- [x] Download all project files from fcp-indi bucket on S3
- [x] Create mapping approach
- [x] Create docs/process for how to contribute
- [x] Merge phenotypic data into a single csv
- [ ] Creat…
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Hey teams! Can you please review my "how to upload raw phenotypic data" tutorial when you have a chance? Thank you in advance :)
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**High-level Question**
Find phenotypic profiles (characteristics) associated with environmental exposures within a [cohort]
**Specific Instance**
Find phenotypic profiles associated with environ…
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**Name**
Ray Stefancsik
**Email**
stefancsik@gmail.com
**GitHub Username**
@rays22
**Details**
Page: /feedback
Browser: Firefox 126.0
Device: Apple Macintosh
OS: Mac OS 10.15
Engine: Gecko 126.0
…
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Hello, thanks for developing the software, I want to save the genotype output "chgeno":
```
geno java.lang.IllegalArgumentException: At least one type of data (genotypic, phenotypic, distances) s…
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Hello,
I've been using GAPIT to run multiple analyses on a series of phenotypic and genotypic data. Everything was running fine one day and the next I rerun and some sets of GAPIT running gave me …
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It is a next step to the discussion which happened in
- https://github.com/bids-standard/bids-2-devel/issues/36
On a recent road-trip with @effigies we briefly discussed it and so far did not see …
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What is the reason for calculating *the estimated percentage of variance explained by the phylogeny is provided as 100x(1 - phenotypic_variance/raw_variance), where raw_variance is the variance of all…
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![](https://img.shields.io/badge/difficulty-intermediate-yellow.svg) - ![](https://img.shields.io/badge/difficulty-hard-red.svg)
![](https://img.shields.io/badge/language-Python-blue.svg) ![](https:/…
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https://www.biorxiv.org/content/early/2018/03/03/275628
> The diagnosis of multidrug resistant and extensively drug resistant tuberculosis is a global health priority. Whole genome sequencing of cl…