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Hello!I got a problem when I 'pip install isosplit6'.
10 warnings and 2 errors generated.
error: command '/usr/bin/clang' failed with exit code 1
[end of output]
note: This erro…
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After updating to figurl-0.2.22 sortingview-0.13.2 I got this error when running `sgs.FigURLCuration.populate([(sgs.FigURLCurationSelection & figurl_key).proj()])` :
```
Cell In[9], line 84
…
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### What happened?
Writing waveforms to an NWB file fails due to a variable naming error on line 1442 of `neuroconv/src/neuroconv/tools/spikeinterface/spikeinterface.py`. `nwbfile` is passed as an …
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As raw electrophysiology data is heavy, the spike sorting algorithm truncates the data into smaller portions (called batches, of size ~2.18 seconds for the latest versions of Kilosort) to work with it…
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Steps to reproduce (Python 3.12.4):
1. `gh repo clone spikeinterface/spikeinterface && cd spikeinterface`
2. `uv venv && . .venv/bin/activate && uv pip install -e '.[dev]'`
3. `sphinx-build -b ht…
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### Describe the issue:
After upgrading to v3.0.1, the filtered signal and prediction are not aligned to each other in time. The problem goes away when downgraded back to v3.0
![image](https://git…
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I am revamping my spikesorting workflow to individually sort shanks. I have been able to do all the prerequisite steps, code included below.
When attempting to run Kilosort4, the following tracebac…
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Hi,
I was wondering if there exist any way to retrieve the spike times and waveforms of unmerged clusters after they were merged in Phy ? And if not, is there a way to retrieve the information of …
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I have tried so many installation methods and cannot get Phy to work whatsoever. Any help would be appreciated.
This is what I did for my most recent installation attempt:
1. Downloaded the enviro…
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Hello, I get an indexing error that originates from MATLAB when I try to run kilosort3 using spikeinterface with our data. I tested our data with other sorters such as pykilosort, spykingcircus and mo…