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Add functions that help pre-filtering (untargeted) metabolomics data based on (and calculating the):
- Dratio
- coefficient of variation (CV)
- % of samples of a phenotype group in which values a…
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I just noticed this in my workflow:
```
Executing:
FATAL: External invocation of Sirius failed. Standard output and error were:
0
QIODevice::read (QProcess): device not open
QIODevice::read…
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Hi,
I'm working with an untargeted metabolomics dataset that was obtained with mass spectrometry, but I'm new to this analysis so a bit unsure as to how to best process it. I saw your repository an…
VR-13 updated
8 months ago
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What might be some simple, relatively inexpensive assays for assess stress in bivalves..
along lines of @mattgeorgephd work
Citrate synthase, NAK Atpase...
Any and all suggestions welcome and…
sr320 updated
7 months ago
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Hi, I am really excited about the TidyMass ecosystem of packages and the work your group has done.
We have been working with untargeted metabolomics data from a Bruker machine that has been prepro…
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1.You have compared asari with xcms, mzmine, msdial in upstream processing, but do you have tools like IPO, autotuner, and SLAW for upstream parameter optimization? After parameter optimization, have …
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I wonder if there is a way to run a *.xml file on a remote server like HPCC (Unix/Linux shell) using the command line. We have access to a server that has up to 1Tb RAM.
I've to analyze over 280 …
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Hello, I tested the software with my own data and I get the following error:
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> GS_impute(Data_test)
Error in checkTmvArgs(mean, sigma, lower, upper) :
‘upper’ not specified or contains NA…