-
I tried to compile a simple SBML model via
```python
import amici
model_name = 'Lotka_Volterra'
model_output_dir = 'Lotka_Volterra_AMICI'
sbml_importer = amici.SbmlImporter(sbml_file)
sbm…
-
In [Section 16.4.2](https://bookdown.org/content/4857/generalized-linear-madness.html#the-statistical-model.-2), McElreath fit a bivariate population dynamics model using ordinary differential equatio…
-
---
id: brian2
version: 2.4.2
specificationsUrl: https://raw.githubusercontent.com/biosimulators/Biosimulators_pyNeuroML/afb4fc5e7452ead7728c03608b4bfeea3db0cdc2/biosimulators-brian2.json
specific…
-
---
id: vcell
version: 7.4.0.26
specificationsUrl: https://raw.githubusercontent.com/virtualcell/vcell/86a4ad9c795f8903a3ddb32f1fa2a7551c973208/biosimulators.json
specificationsPatch:
version: …
-
---
id: vcell
version: 7.4.0.24
specificationsUrl: https://github.com/virtualcell/vcell/releases/download/7.4.0.24/biosimulators.json
specificationsPatch:
version: 7.4.0.24
image:
url: ghcr.io…
-
---
id: copasi
version: 4.34.251
specificationsUrl: https://raw.githubusercontent.com/biosimulators/Biosimulators_COPASI/0e605e2c7b6e7b53eba2244eb04bb084bab25da7/biosimulators.json
specificationsP…
-
---
id: libsbmlsim
version: 1.4.0
specificationsUrl: https://raw.githubusercontent.com/biosimulators/Biosimulators_LibSBMLSim/9c89a61c175d5978ef67bb6863f83b9082aed1cc/biosimulators.json
specificat…
-
---
id: masspy
version: "0.1.2"
specificationsUrl: https://raw.githubusercontent.com/biosimulators/Biosimulators_MASSpy/80abd1612297cb455e91f681c6e2a5476e72b5c2/biosimulators.json
specificationsPatch:…
-
---
id: netpyne
version: 1.0.0.2
specificationsUrl: https://raw.githubusercontent.com/biosimulators/Biosimulators_pyNeuroML/494eeea5e89fb5c2e221ceef64a272fe456ccd41/biosimulators-netpyne.json
spec…
-
---
id: cobrapy
version: 0.22.1
specificationsUrl: https://raw.githubusercontent.com/biosimulators/Biosimulators_COBRApy/d071f21476034d8c99c1f33b0a6a829276f3992b/biosimulators.json
specificationsPatch…