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AMICI-dev
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AMICI
Advanced Multilanguage Interface to CVODES and IDAS
https://amici.readthedocs.io/
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Update valgrind suppressions / skip
#2600
dweindl
opened
1 hour ago
1
Enable seeding C++ RNG
#2599
dweindl
opened
2 hours ago
0
Flaky python/tests/test_jax.py::test_conversion
#2598
dweindl
opened
11 hours ago
2
Release 0.29.0
#2597
dweindl
opened
12 hours ago
2
Raise during unsupported model imports
#2596
dweindl
opened
12 hours ago
1
Bump codecov/codecov-action from 4 to 5
#2595
dependabot[bot]
closed
2 hours ago
0
CI: Fix installation of homebrew packages
#2594
dweindl
closed
2 days ago
1
Add missing fields in ExpData HDF5 I/O
#2593
dweindl
closed
2 days ago
1
Remove unused Solver::newton_maxlinsteps_
#2592
dweindl
closed
2 days ago
1
writeReturnData doesn't save all ReturnData fields
#2591
dweindl
opened
5 days ago
0
writeSolverSettingsToHDF5 does not store all Solver members
#2590
dweindl
opened
5 days ago
2
`writeSimulationExpData` does not store all ExpData fields
#2589
dweindl
opened
5 days ago
0
Add function for writing ExpData to HDF5
#2588
dweindl
closed
2 days ago
1
Fix race conditions in froot and Solver::timeExceeded
#2587
dweindl
closed
6 days ago
1
Faster fill_in_parameters_for_condition
#2586
dweindl
closed
6 days ago
1
Bump codecov/codecov-action from 4 to 5
#2585
dependabot[bot]
closed
1 week ago
0
Doc: Add missing python3-dev requirement
#2584
dweindl
closed
1 week ago
1
Fix `SUNContext` in `ModelStateDerived` copy ctor
#2583
dweindl
closed
2 weeks ago
1
Update steady state solver notebook
#2582
dweindl
opened
2 weeks ago
0
Release 0.28.0
#2581
dweindl
closed
2 weeks ago
1
Update codecov config
#2580
dweindl
closed
2 weeks ago
1
Occassional segfaults in ExampleSplinesSwameye2003.ipynb
#2579
dweindl
closed
2 weeks ago
2
Optional warning in `fill_in_parameters`
#2578
dweindl
closed
2 weeks ago
1
GHA: require Python3.13 tests to pass
#2577
dweindl
closed
2 weeks ago
1
Fix potentially incorrect disabling of Newton's method
#2576
dweindl
closed
2 weeks ago
1
Model::setSteadyStateSensitivityMode affects model simulation even when not computing sensitivities
#2575
dweindl
closed
2 weeks ago
0
Change default steady-state method to `integrationOnly`
#2574
dweindl
closed
2 weeks ago
1
Redundant/ambiguous information in amici::Model
#2573
dweindl
opened
2 weeks ago
0
GHA: Workaround for macos segfaults
#2572
dweindl
closed
2 weeks ago
2
Change default steady-state method to integrationOnly?
#2571
dweindl
closed
2 weeks ago
1
Fix problem ID and output in benchmark collection tests
#2570
dweindl
closed
1 month ago
1
Refactor benchmark collection tests
#2569
dweindl
closed
1 month ago
2
Support for sympy expressions for observables and sigmas
#2568
dweindl
opened
1 month ago
0
GHA: redundant testing in test_python_cplusplus.yml macos_cpp_py, macos_python
#2567
dweindl
opened
1 month ago
0
GHA: PYTHONFAULTHANDLER=1
#2566
dweindl
closed
1 month ago
1
scripts/run-python-tests.sh: line 22: 7262 Segmentation fault
#2565
dweindl
opened
1 month ago
11
Fix benchmark collection gradient check
#2564
dweindl
closed
1 month ago
1
Check for unsupported observable IDs in sigma expressions
#2563
dweindl
closed
2 weeks ago
1
PEtab import: Fix potentially incorrect sensitivities with state-depe…
#2562
dweindl
closed
1 month ago
1
Incorrect sensitivities when a sigmay expression depends on a different observable
#2561
dweindl
closed
2 weeks ago
0
Add missing simulation status codes
#2560
dweindl
closed
1 month ago
1
Add missing simulation status codes
#2559
dweindl
closed
2 weeks ago
0
Rate limit for inf/nan warnings
#2558
dweindl
opened
1 month ago
0
GHA: Ignore python3.13 failures for now
#2557
dweindl
closed
1 month ago
1
Fix dangling pointer in SolverTest.SettersGettersWithSetup
#2556
dweindl
closed
1 month ago
1
Fix crashes when errors occur at output timepoints
#2555
dweindl
closed
1 month ago
1
Release 0.27.0
#2554
dweindl
closed
1 month ago
2
add 3.13 to test matrix
#2553
FFroehlich
closed
1 month ago
5
update jax notebook
#2552
FFroehlich
closed
1 month ago
2
Fix capturing SUNDIALS warnings after 7.1.1 upgrade
#2551
dweindl
closed
1 month ago
1
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