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Despite their protestations fasterq-dump has a pretty awful failure rate and just crashes and burns in a non-reproducible way.
Can we set up a retry system so that we don't lose a whole download se…
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Update the following URL to point to the GitHub repository of
the package you wish to submit to _Bioconductor_
- Repository: https://github.com/kaiqiong/SOMNiBUS
Confirm the following by editin…
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I was wondering how SNPsplit would handle phased human genomes. I didn't see anything in the documentation that seemed to take it into account but I could've missed it. Thanks!
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Hello!
I am trying to align my raw 150bp paired end sequencing files to the mitochondrial genome. My mapping efficiency is
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@dpryan79,
Is there any way this tool might be useful for assays outside of bisulfite sequencing?
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Update the following URL to point to the GitHub repository of
the package you wish to submit to _Bioconductor_
- Repository: https://github.com/BBCG/ramr
Confirm the following by editing each c…
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Hi @PengNi ,
I was wondering if your HX1 nanopore sequencing data is available somewhere?
I could not find the link to data from the paper.
Thanks,
Vahid.
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Hi,
I have a question about the correlation analysis between methylation frequencies of CpGs calculated by DeepSignal/ nanopolish with those from bisulfite sequencing.
When you calculate the Pear…
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Dear @fritzsedlazeck ,
My lab is using NextGenMap quite extensively, as it performs quite well with the highly polymorphic datasets we have (transcriptomic and epigenomic data from pooled wild popu…