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This is not really an issue but could You give me a tutorial on how to run it on BRATS dataset?
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Hi @tkuanlun350 ,
I'm trying to training the network on Google Colab, with Brats Dataset 2017. But When I try to do the crossvalidation, the virtual machine crashes or the execution stops (the data…
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Thanks for the great work.
Would it be possible for you to provide a tutorial for 3D medical image and label augmentation?
Eg: BraTS dataset.
Looking forward to your reply.
Best regards,
Edw…
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Dear all,
I used holisticnet_config.ini for BRATS segmentation, but the output has 2 value: 0,1 ( for BG and Foreground). My histogram_ref_file file is :
labellabelto 0 1 2 3 4
labellabelfrom 0 1 …
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Hello!
I have created a .h5 file with the _LiTS_ Dataset with shape (140, 2, 128, 128, 128), with 140 volumes, 2 labels, a scan and a mask for each, 128 slices, and 128x128 px size. I adjusted the he…
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Hi,
I met an error like following while testing after training with 4ch dataset.
I think I need to change something in testing code, but I don't know exactly. I guess it's due to mismatch between 4…
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Hi David,
Thanks for sharing your code. I am interested in doing a transfer learning off a pre-trained 3D UNET. Can you share you UNET model trained on the BRATS dataset?
Thanks
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Hi, pfjaeger.
I'm trying to run mask rcnn with Brats dataset.
I created 4channel .npy dataset with brats(t1, t1ce, t2, flair).
When I run training, I met some error for like that
assert len(crop_s…
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Hi @FabianIsensee ,
Thanks for the great repository. I test it on Linux and it works very well.
### Q1. How can we take full advantage of multiple GPUs to train several models at the same time?
…