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I downloaded the SNOMED, ICD9CM, ICD9Proc, CPT4, HCPCS, LOINC, RxNorm, and NDC CDMv5 Vocabularies from Athena following the instructions in `/python_etl/README.md` (step 3). When I run a test of the …
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Currently the CDM only represent the UDI as a full string and the size of the string is too small (50 characters) to capture a full UDI string in many cases.
UDI should be parsed before being repre…
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Hi
The Country Afghanistan is not available under RACE vocabulary/domain. Although we can use (8515 - Asian), Better to add new value **Afghani** under race vocabulary/domain.
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In `OMOP CDM sql server constraints.txt` the foreign key `fpk_concept_synonym_concept` is used multiple times.
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ALTER TABLE concept_synonym ADD CONSTRAINT fpk_concept_synonym_concept FOREIGN KEY (c…
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When I load the vocabulary by using the script of OMOP CDM vocabulary load - PostgreSQL.sql, it thow out the error:
ERROR: character with byte sequence 0x9d in encoding "WIN1252" has no equivalen…
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In Tag v5.2.2, Sql Server/OMOP CDM ddl - SQL Server.sql
line 313: visit_source_concept_id INTEGER NULL
Missing "," after NULL
[https://github.com/OHDSI/CommonDataModel/blob/v5.2.2/Sql%20Server…
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@clairblacketer,
CDM v5.3 changed "vocabulary_version" column (table "vocabulary") to be NOT NULL. But after this change I cannot load vocabularies downloaded from Athena into my database, because …
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https://github.com/OHDSI/CommonDataModel/blob/v5.3.1/OMOP_CDM_v5_3_1.csv
Rows 101-114 corresponding to NOTE_NLP table is shifted resulting in missing field names:
![image](https://user-images.github…
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In `OMOP CDM sql server ddl.txt,` `observation.provider_id` has the data type of `INTEGER`. This should be `BIGINT` as this causes the foreign key `fpk_observation_provider`, which points to `provide…
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I would like to suggest adding` PROCEDURE_END_DATETIME` field to `PROCEDURE_OCCURRENCE` table. Many procedures have also a duration which might be important to keep track of. For examples, length of s…