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It appears that the change in the electrostatic potential energy for Reaction Field (`CutoffPeriodic`) is vastly different depending on the cutoff length for the same set of configurations.
I know t…
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@Mikhail-Vaganov some comments on the proposal someone gave me:
Periodic Boundary Condition (PBC)
Distance
The student says that for the Periodic Boundary condition appropriate particles copies…
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## What happens?
```
sudo /etc/init.d/FAHClient start -v
Starting FAHClient . . . /etc/init.d/FAHClient: line 120: /usr/bin/FAHClient: No such file or directory
```
### What should happen?
The…
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## New Use Case
Aspect | Detail
------------ | -------------
Summary | Use cases to simulate, analyze and visualize protein structures
Usecase Group | Molecular Level
Expert | Neil Bruce
Sci…
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Hi all,
After completing the MSMBUILDER2 tutorials, I tried to apply the same steps involved to my own data set of trajectories. After converting these frames to XTC (I was having issues with the DCD…
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## Use Case Update
Aspect | Detail
------------ | -------------
Summary | Documentation missing for the Molecular Simulation use cases
Expert | @adamhospital @aurel-l
### Tasks
…
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Hi @johnssproul,
Thanks for providing wonderful tool to the TE world. I'm quite interested to use RepeatProfiler for my analysis. But encountering same problem again and again for input fastq/refere…
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Hate to bother with more issues, but I'm only finding these because of how useful I've found ARAX/ARAX interface 😄
I tried running the following query for finding chemicals connected to SPMSY, which…
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### Expected behavior
Notebook should fail when an import does not succeed, and the user needs to see where and what is the problem.
### Actual Behavior (please include screenshot if possible)
…
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If "Anything" yields a bunch of free items, "Free" should yield the same thing, right?
https://youtu.be/HxOm51r8ERY
Seems to only affect `Following + New` query.