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There may be a problem reading metadata in multi-plane images from OMERO. It seems that we are not correctly detecting or recording the planar configuration of a C=3, Z=10 image stack.
Balaji Ramalin…
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While creating a an omero.server plugin, I came across a small issue when setting default value for a List. Basically, the default value seems to be ignored when creating the GUI, and the first on the…
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work: 1) in ic_importer - to organize storage of channels info in OME channels structure when imported to Omero and 2) retrieve this channels info when loaded form Omero into FLIMfit
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See e.g. the `tubhiswt.ome.tif` example.
dscho updated
10 years ago
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@manics reported a memory leak when running Pychrm inside OMERO. He provided the following script which monitors memory usage of a program with a specified PID:
``` #!/bin/bash
if [ $# -lt 1 -o $# -…
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Hi guys,
I just tried to test the python-bioformats library and got stuck with I problem. I am not a programmer, so my question might be silly ...
When I open the file inside Fiji using the BioFormat…
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Apologies if this is my mistake instead of an issue with SublimeJEDI.
For some reason, in one case I just can not get sublimeJEDI to do code completion.
To replicate:
I create a virtualenv called '…
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At present https://github.com/manics/omero-pychrm creates FeatureSets and Signatures directly, to allow reading in from an external data source (OMERO.tables). See [TestPychrm.createFeatureSet](https:…
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fetching http://www.cellprofiler.org/linked_files/CellProfilerDependencies/apache-maven-3.0.4-bin.zip to /Users/dlogan/github/CellProfiler/imagej/apache-maven-3.0.4-bin.zip
fetching http://www.cellpro…