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---
id: vcell
version: 7.5.0.80
specificationsUrl: https://github.com/virtualcell/vcell/releases/download/7.5.0.80/biosimulators.json
specificationsPatch:
version: 7.5.0.80
image:
url: ghcr.io…
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I am investigating 3 different brines in the NF DSPM-DE block. They have the following compositions:
Brine 1: TDS - 60,500 ppm
H2O: 897.669 mol/s
Na_2+: 14.050 mol/s
K_+: 0.291 mol/s
Mg_2+: 1…
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Minimal reproducible example:
```python
import numpy as np
from glum import GeneralizedLinearRegressor
rng = np.random.default_rng(0)
X = rng.normal(size=(100, 100))
X[:, 0] = 0
beta = np.z…
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The `PerfForesightConsumerType` has two `poststate_vars`: `aNrmNow` and `pLvlNow`
https://github.com/econ-ark/HARK/blob/master/HARK/ConsumptionSaving/ConsIndShockModel.py#L1450
However `pLvlNow` i…
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I'm surprised that *removing* a dependency does not remove it and sub-dependencies from an existing `conda-lock.yml` (condalock 1.0.5):
Steps to reproduce:
1. `conda-lock lock --mamba -f environ…
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## Summary
Solve a quadratic program (or QCQP) using cplex/gurobi with exponents that are written using floats, rather than integers
### Steps to reproduce the issue
Use `m.x1**2.0` instead o…
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A request from Matthias: Have a way to set tolerances relative to some concentration. He has cell-sized compartments in some of his models and using amount-based tolerances results in far too loose to…
0u812 updated
8 months ago
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**I'm submitting a...**
- [ ] bug report
- [x] feature request
## Current Behavior
conda operations appear to be particularly slow, this seems to have got worse as the versions have prog…
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**Describe the bug**
Trying to run migrate on `ecs` example causes a panic in katana
**To Reproduce**
Start katana with:
> ./target/debug/katana --seed 0
Build the project first
> ../../ta…
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I do not understand this error and I feel like the solver is stucked when this errors appear