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Hi,
it's not really an issue... I would like to date the WGD events using the method in Vanneste et al (2014), using the anchors identified by wgd. As both wgd and the method used by Vanneste et al. …
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Change to be consistent with Chai and Craig.
https://github.com/mskcc/facets-suite/blob/49ffc254f8734b815cb94ee9c1c3a2becffab97f/R/copy-number-scores.R#L69
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Hi!
having all this:
```
--------------- Linux system info ----------------
Distro: Ubuntu
Release: focal
Kernel: 5.4.0-37-generic
---------------- DisplayLink info ----------------
Dr…
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Hi,
I am writing here to seek your advice on using wgd for my study.
Based on the paper and manual, I first got my genome_cds.fasta, and then used this command-
```
wgd mcl --cds --mcl -s ge…
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Hi,
I am interested to use this tool in order to perform Ks and WGD analysis. I am using orthofinder for clustering of genes and hope to use this tool to plot comparison between species.
I follo…
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Kinda silly that this is still done at the shell, and moving the build process to Docker means that it'll be that much harder to just nip over to shell and run something.
So, create an admin that doe…
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The Docker container does not run when we provide a custom configuration file. The code below in the "/entrypoint" file fails the DB test for any system that does not have the proper host and credent…
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@BitEXALT please find and prepare the list of bloggers (blog and how to contact) and youtubers (channel and how to contact) linked to semantics (machine-redable, JSON-LD, Linked Data) and blockchain. …
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Hi Dr. Zwaenepoel,
I successfully installed the software, but got an error when I tried to ran "wgd ksd" as:
`wgd ksd -o ./ -n 12 ./blabla.blast.tsv.mcl blabla.cds.fa`
The mcl file is produced by …
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Hello. My Surface Pro 7 with Ubuntu 18.04 fails to pair bluetooth devices.
Specifically, when I try to connect my Airpods or Airpods Pro with the SP7, loading circle never ends and it's timed out.
A…