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bedToBdgBw.sh was use macs pileup to generate pileup track (bw,bdg) from input reads (bed) with reads extend half of window size in both direction，such as : macs2 pileup -i $input -B --extsize $[windo…
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Some shapes will be used as templates and will be selectable in the UI (such as `bds:PersonShape`), some (ex: `bds:FemaleShape`) will be used as validation but never as templates. How do we discrimina…
eroux updated
4 years ago
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Hello,
Is it the intention of `--vcf_info_field ANN` to adhere to the VCF ANN specification? While some fields do match, there are several that do not, and more troublesome for consumers some that…
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how to create CS_discovery object when using extrenal compartment results?
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Thank you, Dr. Gallas and colleagues for supplying software for MRMC analysis.
I have a study design where I have six readers, in which each read is correct or incorrect(binary). However, each r…
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Hi,
I've analysed Medipseq data using MACS2
here is my script:
macs2 callpeak -t Tumor_rmdup.bam -c Control_rmdup.bam \
-f BAMPE -g hs \
-p 0.01 \
-n RCC10_L4 \
--bdg \
--outdir ${OUTPUT_D…
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```
What steps will reproduce the problem?
1. From a freshly booted VM, I run the following setup script:
cd netmap/LINUX
sudo rmmod veth
sudo insmod netmap.ko
sudo insmod veth.ko
cd build-apps
sudo …
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Steps to reproduce the problem:
1. create and attach 252 ports in valea:
```
#bash
for ((i=0; i
valea:a252: Cannot allocate memory
Why?
The max ports in a vale should be 254 according `NM_B…
nanjj updated
6 years ago
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