-
## Introduction
[BIDS or Brain Imaging Data Structure](https://bids.neuroimaging.io/) can be decribed as a simple and intuitive way to organize and describe your neuroimaging and behavioral data.
…
-
A while back in the discord bids channel some contributors discussed about a lightweight BIDS I/O library to integrate into nilearn. We have developed such a lightweight library at the ANCP lab and …
-
As a part of the BIDS Steering group we were approaching different publishers about possibly adding some indication (e.g. banner) for the papers which are accompanied/process/etc BIDS compliant datase…
-
pybids version: 0.9.4
I have corresponding jsons and niftis in a BIDS folder from heudiconv, but nifti.get_metadata often returns a value that is the opposite of what the json contains.
```
In …
-
should be as simple as
```
docker run -it -v $PWD nidm/bids2nidm $PWD
```
to get nidm.jsonld (ideally, but could be option to direct which serializations to produce, e.g. -f jsonld,ttl)
-
I should conform the function names and doc strings to use one word or the other. It's typically considered more polite say participants, but bids uses the subject vernacular.
-
### Summary
It would be helpful to have support for [mideface](https://surfer.nmr.mgh.harvard.edu/fswiki/MiDeFace) a command-line tool for defacing MRI scans in Freesurfer. This addition could enha…
-
### Lack of formal tests
I think my main concern would be that the code base does not seem to have any
automated tests that could help define what is the expected behavior of part of
the code (un…
-
Hi experts,
I faced a problem using PhysIO tollbox on Octave. I have BIDS tsv physio files and i want to run them in PhysIO. I managed to open SPM in Octave and add Physio toolbox. So first of all, …
-
So, `${singularity_cmd} recon-all -s ${subject_id} -qcache` fails. This was with `fmriprep_23.2.0a3.img` (I did not try earlier versions)