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I am trying to use the original code and parameters to preprocess the slides in CAMELYON17,
but I encounter this problem as seen in the picture.
As you can see,
the first problem is that the tis…
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Hi,
I have serval questions,
1. The tumor patches number of different centers of Camelyon17 varies hugely. For example, the tumor patches number of center **UMUC** is about the sum of the other fo…
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Thanks for your great job. The code not includes the dataset in your experiments. So could you provide the dataset?
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I wonder if the log folder used during training is the prediction_dir described in Get Started: Evaluating trained models.
I tried to reproduce the ERM result on a subset of camelyon with the follo…
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Hello,
This is a really good framework for WSI. And I was wondering about one method "getSpacing()". In some images (e.g. Camelyon17 the size of one pixel in microns ("openslide.mpp-x") is not prov…
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I am facing some problem with the annotation of CAMELYON16 test data. I use the code provided to generate annotation mask but when I try to count the number of tumors inside the mask, it returns only …
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I tried to calculate FROC using your resnet18_base.ckpt, and I got:
**Avg FP = 0.25
Sensitivity = 0.6061946902654868
Avg FP = 0.5
Sensitivity = 0.6769911504424779
Avg FP = 1
Sensitivity …
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Hi,
I have seen the CLAM was trained and Evaluated over Camelyon16 and 17 challenge. Can you give more insight on how the data was combined, what was the number of ITC, Macro, Micro and Negative in…
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Thank you for open-sourcing the code of the paper. While I am trying to use your program to segment the CAMELYON17 dataset, I noticed that the stitches of a lot of slides contain large amounts of arti…
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