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Tripal/Chado Fields are automatically attached to content types using our Tripal Fields Collection service. This service uses a YAML file describing the field settings and content type mapping which s…
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### Publication and Data Information
https://bmcgenomics.biomedcentral.com/articles/10.1186/s12864-015-1331-9
### Additional Information
Seems to have two species, possibly assembled as a single …
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### Publication and Data Information
Transcriptome analysis of 4 cultivars, all in a database so probably able to be downloaded:
https://www.biorxiv.org/content/10.1101/301358v1
### Additional…
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### Publication and Data Information
https://www.nature.com/articles/nature06856
This is quite old, lets check around for any newer versions (phytozome, ncbi).
### Additional Information
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This is a follow on from https://github.com/pombase/pombase-chado/issues/678
We're using `owltools --save-closure-for-chado` to generate the closure we load into Chado.
@ValWood noticed that th…
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### Feature description
We want to improve documentation
First page of documentation is requirements. We really need ot link to the background stuff.
@bradford's idea is that chado is weaklink. …
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Note, these are errors for a successful submission ie not validation errors.
Looks to me like its the mail function accessing indices that werent set in `params` ie that are used in a different m…
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### Publication and Data Information
[https://www.nature.com/articles/nature06148](https://www.nature.com/articles/nature06148)
### Additional Information
This information can be accessed thr…
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Major bug: The default bundle storage cvterm is set wrong.
CVterm set by the node when creating interpro analysis:
```
chado_insert_property($record, array('type_name' =>'Analysis Type', 'c…
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Four tripal fields from this module in the ```load()``` function initialize the field with this code:
```$entity->{$field}['und'][0]['value'] = NULL;```
When editing e.g. an organism and then savi…