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I am having an error when trying to calculate sidechains torsions and backbone ca distances;
Traceback (most recent call last):
File "/pensa/scripts/compare_feature_distributions.py", line 165, …
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Hey Michael,
For a current project we are working on, we are trying to use Sage with HLA peptides, specifically from the [thunderPASEF method](https://www.nature.com/articles/s41467-024-46380-y). W…
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## Context
This might be related to #62, but unlike that this doesn't involve a "complex" regular expression.
https://grep.metacpan.org/search?q=setmask&qd=&qft=
reports 29 distributions but …
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This is a feature request. Please implement [Earth mover's distance (EMD)](https://en.wikipedia.org/wiki/Earth_mover%27s_distance). It can be used to compare probability distributions.
Actually, it…
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It would be nice to investigate cpu/io/mem/network performance and then compare it to standard distributions on devices. There might be overheads we have that we can reduce.
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### Description
Add log likelihood, AIC, BIC fit statistics to the distribution module.
### Purpose
Allows comparing different distributions.
### Use-case
_No response_
### Is your feature reque…
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Currently comparing two motifs with `seqcor()` doesn't generate a p-value. The score distributions for `seqcor()` need to be generated.
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Would it make sense to be able to do arithmetic on the kde objects, e.g. to add and subtract them, for comparing distributions?
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## Issue
Hi folks, thanks for the great package! I'm trying to compare two different 5D histograms. In the case that there is more than one histogram the Contourf option does not provide a gradi…
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### Presentation of the new sampler
DiGS is an auxiliary variable MCMC method where the auxiliary variable $\tilde{x}$ is a noisy version of the original variable $x$. DiGS enhances mixing and helps …
jcopo updated
1 month ago