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3D convolutions are important too!
Like 2D images in nature, 3D Volume data is very common, such as medical CT and MRI data, where voxels are uniformly distributed in 3D space.
The medical and …
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Hi,
I was trying to segment the vertebrae from the CT files with MONAI radiology_full_ct-upgraded-HYBRID and radiology apps with these commands in a multi gpu (8 x NVIDIA T4) environment:
1. m…
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Hello everyone, I'm trying to export a nii segmentation file in a RTSTRUCT-DICOM file.
The ROIs in DICOM appear rotated.
The dataset I have from https://nbia.cancerimagingarchive.net (CT/ Whole …
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**Is your feature request related to a problem? Please describe.**
Part of https://github.com/Project-MONAI/MONAI/discussions/6641 for the bundle enhancement, currently it's unclear how `bundle.Confi…
wyli updated
2 months ago
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liver CT scans, 8318 images, 20 training cases]
Heimann, T., et al.: Comparison and evaluation of methods for liver segmentation
from CT datasets. IEEE Trans. Med. 28(8), 1251–1265 (2009)
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- [x] watershed,
- [x] [pciseq](https://github.com/acycliq/pciSeq)
- [x] nuclear expansion
- [x] Cellpose
- [x] [Baysor](https://github.com/kharchenkolab/Baysor),
- [x] [Stardist](https://…
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Ive taken the default radiology app and used it to train a deepEdit model to do volumetric MRI pancreas segmentation.
The auto segmentation works well however I am experiencing a strange issue when…
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Hello, I applied the algorithm to a CT scan that I have, and the resulting segmentation in itself seems to be good, it looks like a nice brain, but it doesn't seem to fit my the CT scan that was in in…
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In GitLab by @DavidPerez-Suarez on Aug 20, 2019, 16:58
# List of images (and buttons) to be loaded
*marked done what's on `load-image-files`*
- [ ] MRI T1 + C (needs update name)
- [ ] MRI T2 (nee…
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the final visualization, how can MRI(CHAOST 2) and CT (SABS) original images be fused with each part of automatically generated the region segmentation diagram to produce the effect diagram in your pa…