-
## 1. Bug description
The column names from topSNPs is not inheriting what we specify through echodata::construct_colmap
When I pass echodata::construct_colmap, I would expect the column names s…
-
## 1. Bug description
When doing finemapping for QT, it does not really make sense to pass N_CAS, N_CON, or proportion_cases.
Similarly, if I do not have t_stat, I would set this to NULL. Otherwis…
-
## 1. Bug description
`finemap_loci` hits errors when run twice in a row.
### Console output
```
# Paste console output here (e.g. from R/python/command line)
```
### Expected behavio…
-
## 1. Bug description
finemap_loci pipeline fails to find echoverse package?
### Console output
```
Registered S3 method overwritten by 'GGally':
method from
+.gg ggplot2
⠊⠉⠡⣀⣀⠊…
-
## 1. Bug description
The tool fails to perform the munging over chr:bp input data
### Console output
```
******::NOTE::******
- Formatted results will be saved to `tempdir()` by defaul…
-
## 1. Bug description
The simple pipeline does not work.
I fall in the following error:
```
Error in message(e) : object 'e' not found
```
Also, just a **note**
I found easier to track …
-
## 1. Bug description
I am trying to annotate finemapping results against brain tissue marks from ROADMAP, but there is this bug at the end of the query
### Expected behaviour
## 2. Repr…
-
## 1. Bug description
This is the continuation of a bug description in #113.
I tried to pass to finemap_loci, the munged data, and the issue with sample size keeps arising
When I pass an intege…
-
## 1. Bug description
Did not have a change to read #111, but it may well be related to it
### Console output
```
******::NOTE::******
- Formatted results will be saved to `tempdir()` by …
-
## 1. Bug description
I am running the basic pipeline, and it fails outside the MAGMA.Celltyping container.
## 2. Reproducible example
### Code
```R
topSNPs =1.99.2 via Biocondu…