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I'm attempting to use toil to run CWL workflows where the workflow file URLs are going to be behind auth. The documentation doesn't seem to directly address how implementations should handle this situ…
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the spec says `/tools/{id}/versions/{version_id}`
I assumed this `version_id` referred to the `id` field in the tool version JSON, but dockstore uses the `name` field for this:
https://dockstore.org…
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If I'm creating a genomicVariant specification from a VCF variant record, I can't see how I'd specify multiple alleles in a single genomicVariant: the variation property seems to be singular? For exam…
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@ianfore From our Connect call, I'm thinking it might be helpful to create a "getting started guide" as an entrypoint to being able to run these scripts. As we want more of the community to use and co…
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* brainstorm use cases
* try to stand up part or all of golden demo
* hack brining together data from different sources
* hack together systems/stacks using these APIs (WES, DRS, etc)
* work on ot…
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## Feature Request
### Desired behaviour
There's an old version of the TRS validator used as a test.
See whether the new validator can be used as a test.
┆Issue is synchronized with this [Jira St…
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See https://data-object-service.readthedocs.io/en/latest/ for an example (related DRS issue here: https://github.com/ga4gh/data-repository-service-schemas/issues/56).
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**Describe the bug**
Looks like an inconsistency between the TRS definition ( https://github.com/ga4gh/tool-registry-service-schemas/blob/v2.0.1/openapi/openapi.yaml#L266-L273 ) and our webservice ( h…
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Discussed in Hinxton, but looking for general feedback. Last year there was a debate which eventually led to the addition of the `workflow_attachment` feature, which sits alongside the `workflow_url`.…
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Currently, multiple endpoints make use of the `{type}` path param to specify the descriptor type of a workflow resource (e.g., `CWL`, `WDL`). As we are currently implementing a WES that accepts a (ver…