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Now that the [minimum metagenome covers](https://dib-lab.github.io/2020-paper-sourmash-gather/) paper is reasonably baked, I've been thinking about next steps towards strain-resolved metagenome decomp…
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https://github.com/meta-introspector/time/blob/main/2024/05/20/notes-jmd.org
Thank you for providing a detailed overview of the major ideas behind the introspector project. Here's a summary of the …
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Trying to use the server at https://jurikuronen.shinyapps.io/gwes-explorer/, for the first time. Have outlier file from SpydrPick analyzing 227 genomes. When I tried to work with the data on the webs…
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I used "trinotate_report_summary.pl" to generate a "cXp_summary.html" file, however, this html file shows up blank when opened in Google Chrome or Firefox.
Why?
and, here are the contents of the…
ljyls updated
3 years ago
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Hello there,
I want to build a pangenome for a genus of grasses (_Hordeum_) I am working on in order to do some analysis. I have been playing with `pggb` for a while now but I think is time to requ…
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It would be nice to have real-world example-json files
together with directory/file-collection, which are created by
running a scraper with a certain scraperJSON-json file.
That would be helpful to i…
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Dear Andrey Zamaraev,
I will try to stay short (at least I tried). I am a biology PhD student working on topics in evolutionary and theoretical biology. I was just thinking on a project to try out …
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## overall aim of the lab for coming 10 years.
We now have the ability to create trust with software, as shown by Ebay, AirBnB, and Uber. Key is the star rating mechanism. We want to generalize thi…
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Update the following URL to point to the GitHub repository of
the package you wish to submit to _Bioconductor_
- Repository: https://github.com/ccb-hms/scDiagnostics
Confirm the following by ed…
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This issue will collect all feedback submitted via the feedback form at the end of each tutorial
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Results have been [aggregated](https://nbviewer.jupyter.org/github/bebatut/galaxy-training-m…