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### Expected behavior
I want to run the srun command of slurm on the host machine in the apptainer container. Regardless of the path of the srun command on the host (because the environment of slur…
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One datapoint is that locally on OpenMPI 5, the test ran fine on one GPU.
There was a discussion elsewhere (maybe @maleadt remembers) if that flag is still needed or what MPI versions can now hand…
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Hi I'm trying to run the openai compatible server on an HPC cluster (that has apptainer instead of docker). I converted the docker image to an apptainer `.sif` file.
However when I try to run the …
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I'm experiencing an Illegal instruction error when attempting to run RATTLE correct. The error is consistent when using different fastq files with the only difference being the number of reads reporte…
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Currently, when running grids, there are several files created, which aren't needed.
E.g. when running single stars, we still create the binary inlists and copy the binary source code. There are mo…
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### Problem Description
At the moment the threads and RAM resource available to Snakemake are currently stored in `config.yaml`.
```yaml
# Config file for rotary
## Directory for database in…
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Monitoring currently only works for Gearshift due to various hard-coded values. The hard-coded values should be replaced with variables and the variables should be defined in either
`group_vars/*/var…
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I used to run BERTopic without a problem on my job's HPC on GPUs but now it seems like it doesn't move beyond this stage:
2024-02-23 12:24:56,663 - BERTopic - Representation - Extracting topics from …
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Title says it all. I'd cherish the ability to easily install Nix with nix-command, flakes, and installation receipts on shared machines where I don't have root privileges, particularly high-performanc…