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I have tried with and without `--imzml_mode continuous` but no difference in output it seems
```
ls -ltrh /cluster/work/users/ash022/240605_200ngHelaQC_DDAlong_Slot1-54_1_7643.mzML /cluster/work/…
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[I've used and played around with lots of commandline utilties (optparse, trollop, micro-optparse, commander, optitron) and I think acclaim is shaping up to be really awesome. I like the way you've o…
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some of code are as follows:
`library(Cardinal)
options(scipen = 999)
min_mz
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I am trying to convert some HeLa sample generated raw data and on an average it takes about couple of hours, for example
```
timsconvert --chunk_size 10000000 --imzml_mode continuous --verbose --i…
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Hi Kylie,
In previous version, I can read imzML without any issue but after install version 3.6. I got this error:
> readMSIData("test.imzML")
parsing imzML file: ‘/home/msi/test.imzML’
Error i…
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Dear Dan Guo,
I am currently working on a paper and would like to your the bladder_cancer dataset you provide here. However, I was unable to read the intensity matrix of your data. Accessing the fe…
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In `parseImzML()`, we should compare the size of the ibd file against the binary data array offsets in the imzML file, and give a warning if the ibd file is too small for the specified byte offsets.
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Hi team
Encountered another error. Not sure how to go about this.
I am using [this imzml](https://zenodo.org/record/1560646#.YVK1o7gzbbi) with the uniprot_mouse.fasta proteome
```
Job in er…
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Dear Kylie,
I have a MSI data acquired with a SIMS instrument.
I was able to analyze the data using Cardinal v2.14. But I cannot process the same data with the latest Cardinal version(v3.5.0)…
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Dr.Wabdelmoula,
Would you like to provide this sample data"MouseKindey_z1.h5"?I'd like to try your code because I don't know much about the h5py package.Thank you very much.