kuwisdelu Cardinal issues

kuwisdelu / Cardinal

Mass spectrometry imaging toolbox

http://www.cardinalmsi.org

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issues

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Check number of samples in `meansTest`

#48 kuwisdelu opened 1 day ago
0
NEED HELP?

#47 kuwisdelu opened 1 week ago
0
Can I rotate the image (plot)

#46 qingnanl closed 3 weeks ago
1
Default spectrapply() should not include index

#45 kuwisdelu closed 2 weeks ago
0
mass.range specified but readImzML/readMSIData returns MSI data with full range of m/z

#44 QQhuan closed 2 months ago
2
Bug in `meansTest()` with random effects

#43 kuwisdelu closed 2 months ago
1
Installation of Cardinal 2.2 fails

#42 Seveler closed 3 months ago
1
README FIRST

#41 kuwisdelu opened 3 months ago
0
`Cardinal::image` can not generate correct figure in 3.6.2 version

#40 shaman-yellow closed 3 months ago
13
sgmixn issue while running SpatialDGMM

#39 AyushPraveen closed 3 months ago
5
error for image in 3.7.0 version.

#38 YzGLab closed 3 months ago
2
Default `tolerance` in `pixels()` is too large

#37 kuwisdelu closed 4 months ago
2
Unable to read imzML

#36 Numliap closed 4 months ago
4
Documentation for cardinal

#35 QQhuan closed 4 months ago
1
Typo in Cardinal3-guide vignette

#34 sslakkimsetty closed 4 months ago
0
Typo in README for installation instructions

#33 sslakkimsetty closed 4 months ago
1
Rename rcc-sscg.pdf to rcc-sscg_image.pdf

#32 ddkale2022 closed 5 months ago
0
Unable to preprocess MSI data with lasted Cardinal

#31 YonghuiDong closed 4 months ago
4
Fix offsets in .new.MSProcessedImagingInfo

#30 leoschwarz closed 10 months ago
0
Update readImzML.R To fix NULL representation issue

#29 MASHUOA closed 10 months ago
0
Add the default value of representation in readImzML

#28 MASHUOA closed 10 months ago
1
Normalizing procedure creates a big object

#27 MASHUOA closed 4 months ago
1
R crashed using gaussian smooth in image() on Windows

#26 ZhengnanCheng closed 4 months ago
0
Possible bug: feature.groups remain unchanged when no features in range in image() function

#25 YonghuiDong closed 4 months ago
0
image() after cbind()

#24 goterm closed 1 year ago
1
writeImzML() gives negative offsets on large files on Windows

#23 kuwisdelu closed 4 months ago
0
mass.range specified but readMSI returns MSI data with full range of m/z

#22 MASHUOA closed 4 months ago
1
unable to subset "MSProcessedImagingExperiment"

#21 MASHUOA closed 2 years ago
0
mzBin error: when binned mz list range greater than image data mz range

#20 MASHUOA closed 4 months ago
0
error when plotting image of reference ion after normalization (method="reference")

#19 MASHUOA closed 3 years ago
1
error installing from source for Apple silicon processors

#18 weljielab closed 1 year ago
2
Fix compilation on macOS

#17 jmarshall closed 1 year ago
2
spatialDGMM fails to converge (loops indefinitely?) if mass intensity is constant within group

#16 bentyeh closed 4 months ago
0
Bug with groups argument when calling image() within a user-defined function

#15 bentyeh closed 4 months ago
0
intensityData(object) <- value, peakData(object) <- value methods are broken

#14 bentyeh closed 4 months ago
1
Fix typo in Cardinal-package.Rd

#13 bentyeh closed 10 months ago
0
error in image when all intensity values are equal

#12 NHPatterson closed 4 months ago
0
Missing TRUE/FALSE value in: if ( all(class==pred$class) ) break

#11 gtluu closed 4 years ago
1
spatialFastMaps types spatial neighbors as numerics instead of matrices

#10 gtluu closed 4 years ago
1
Fix bug in 'summary' for 'PLS'

#9 bentyeh closed 4 years ago
0
Feature request: adding interactive plot and MSI image

#8 YonghuiDong closed 5 years ago
1
normalization is not processed

#7 DennisJakob closed 5 years ago
2
Cannot pass for loop variables to image()

#6 DennisJakob closed 5 years ago
5
Error writing large imzML files

#5 kuwisdelu closed 5 years ago
1
Getting "out of memory" error while normalising the raw data (on a machine with 200GB RAM)

#4 Ky5595 closed 5 years ago
1
reading larger than memory files in cardinal 2.0.2

#3 catalintucureanu closed 5 years ago
9
Some question about Cardinal package

#2 YonghuiDong closed 6 years ago
2
Test issue

#1 kuwisdelu closed 6 years ago
0