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Hi @evanpeikon
Thank you for sharing this analysis. Interestingly, I get similar numbers of cells and genes, but I don't transpose the AnnData object. I end up with nearly identical numbers of gen…
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**What is the feature or improvement you would like to see?**
I would like to see a more flexible interface to the Leiden community detection function that allows one to specify one's own "modulari…
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The [Louvain algorithm](https://en.wikipedia.org/wiki/Louvain_method) is commonly used to identify communities in graphs, and is present in other libraries/tools such as [NetworkX](https://networkx.or…
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Hello! Thank you so much for this package. I would like to run svds using the BPCells wrapper function on a matrix containing 9,096 genes and 4,188,533 cells. I followed the workflow outlined in the v…
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`README.md` needs to be updated for Katana world.
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### Do you need to file an issue?
- [X] I have searched the existing issues and this feature is not already filed.
- [ ] My model is hosted on OpenAI or Azure. If not, please look at the "model provi…
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Hi, thank you for your work, which has made our single cell analysis much faster.
However, when the nnz of the matrix exceeds the maximum limit of 32 bits, the preprocessing process needs to be perfo…
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### Description
The Figure seems to be missing in this HTML view for me
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Hi
I would love to be able to try out `Symphony` for label-transfer, but with a set of labels defined by an alternative method to `Harmony`. So for example, starting from an `sce` object where the …
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Hi,
Thanks for these scripts, seems very useful. However, I have some problem running it. I set up a colab notebook with copy-pasting and editing the code so it is runnable without cmd arguments. …
gezmi updated
2 years ago