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in code line “#Subcluster mature enterocytes
sc.tl.louvain(adata, restrict_to=('louvain_r0.5_entero_sub', ['Enterocyte mature']), resolution=0.25, key_added='louvain_r0.5_entero_mat_sub')”
i run ,ap…
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Dear EngeLab:
After we run your example code (kc
Thank you very much for your attention and consideration.
Sincerely yours,
Chen Xie
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branch master:
- [x] OLAP Test: Skip Louvain and fusiform_similarity#12 and #19 https://github.com/hugegraph/hugegraph-test/pull/12
- [x] Hubble loader Test https://github.com/hugegraph/hugegr…
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Terminal Output:-
.
.
.
computing neighbors
computing neighbors
computing neighbors
finished: added to `.uns['neighbors']`
'distances', distances for each pair of neighbors
'con…
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Thanks a lot for making your implementation public. I am able to understand this do-while in bits and pieces but not fully. I am not able to understand when this loop breaks
{
(stop 0 && count < maxI…
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**Summary:**
Running louvain algorithm with the following cmdline:
`./louvain market ./soc_LiveJournal1.mtx --undirected --max-iters=2 --max-passes=3 --quick=true --device=0`
will have the followin…
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```
adata = scv.datasets.dentategyrus()
scv.pp.filter_and_normalize(adata)
scv.pp.moments(adata)
scv.tl.louvain(adata, resolution=2)
adata.obs['louvain'].cat.categories = [k + ' some celltype n…
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Hi,
For some undirected and weighted networks, when I run the **_community_louvain_** function an error message emerges: "BCTParamError: Modularity infinite loop style G. Please contact the developer…
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Hi,
I am trying to carry out some analysis with ScanPy Anndata object where I have a dataframe containing clustering information at different resolution as shown in the columns of louvain_0.1, louvai…
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Hi!
Thanks for publishing the code and the data from your paper! I am trying to experiment with the example code provided in the README file but I get an error when I run `describe_communities_with_p…