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We have measured logD data and metabolic clearance data for [8 compounds in Series 4](http://malaria.ourexperiment.org/biological_data/8408/post.html), from Monash. The data are all contained in the […
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The latest data came back from CDCO a few days ago. Posted raw [here](http://malaria.ourexperiment.org/biological_data/15768/New_Metabolic_and_Physicochem_Data_on_Frontrunners.html). Summary image bel…
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Hello everyone. I am trying to do a Elementary Flux modes but I got the next error. I am working on windows
`Exception in thread "main" java.lang.OutOfMemoryError: Java heap space
at ch.jav…
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I see that we have both "basic metabolic panel" and "basic metabolic profile" in this KNART. I understood them to refer to the same thing, and as a group we decided to use the word "panel". Need to…
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To do:
- [ ] Euk + prok + viruses interactions based on gene abundance
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Hi,
I installed METABOLIC on our server and ran the test data which worked without any issues (I eventually stopped it to run my own data but everything seemed fine). Now, I want to run it on my MAG…
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Reviewing the annotation intersection violations alerted us to:
https://amigo.geneontology.org/amigo/reference/PMID:12485443
This paper describes plasma membrane lipid profiling, and as such isn't…
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I assume this isn't intended, since Metabolic Generator has a small built-in power capacity to not waste food. What I assume happens, is the Metabolic Generator only provides power if there is more th…
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Hi,
I have been working with m2m to do some microbial community metabolic interaction analysis and I have stumble with and issue. When trying to run the mincom minimal_community.mincom() function o…
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[Kestrel's Outpost Spreadsheet](https://docs.google.com/spreadsheets/d/1hSeWV10yQV_QNHgEh-h7vg6r2XfboJQj8Anex025ras/edit?gid=492264006#gid=492264006) has some stuff about demand/supply so you know wha…