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Opening this issue on behalf of Anush @anushchp:
#### Problem description
> It complains that O2 consuming reactions don’t have fixed bounds. Thermodynamics (using pyTFA: https://github.com/EPFL-…
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load wikipathways
load recon3d
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Can this be used to integrate only metabolomics data in bacteria metabolic model ?
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### Description of the issue:
The function `checkRxn` produces a struct as a report. In it, 4 arrays are included: `reactants`, `products`, `canMake` and `canConsume`. Therefore `canMake` must has th…
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Hi,
I am trying to perform GO enrichment analysis for non-model plants. Please let me know if I can use GO_MWU with non-model species for GO enrichment analysis.
I tried to download a gaf file (a…
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Hi Cecilia!
I have been having the same issue described in the Web app error #8 issue conversation, but was having trouble generating a shame abundance table with all of KEGG metabolites using the …
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Dear dev
Any direction you can point toward to analyse mouse tissue single cell data?
Thanks
Gael
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#### Problem description
>A related one is the need for ATP production to be lower than the thermodynamically feasible limit. Typically 60-80% of the limit
- Radhakrishnan Mahadevan
> Hi Krishna,…