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This issue is to provide a shared space (a bit more structure than slack) for all the members of the community working on tidy adapters/analysis frameworks for proteomics/metabolomics/mass spectroscop…
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**Submitter Name and ORCiD**
[Holly M. Andrews](https://orcid.org/0000-0002-5173-0826)
**Submission ID**
53da7915-3809-48bd-92b9-42a793b92aaa
**Have data already been generated for your study?…
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Hi!
I would like to try MultiMAP for integrating a variety of datasets on a specific protein family.
This includes classical omics data like RNA-seq or targeted metabolomics, and also structural inf…
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At the [PhenoMeNal project](http://phenomenal-h2020.eu/home/) we are working towards making large scale computation for metabolomics possible on cloud providers. We are working to make use of Galaxy a…
pcm32 updated
6 years ago
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Is it possible to classify features just on the commandline in linux rather than the GUI?
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issues are:
- [ ] use of compact URI for gene, transcript, exon identifiers
- [ ] use of compact URI for sample identifiers / experimental conditions
- [ ] explicit declaration of `quantitation t…
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WGCNA
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Metabolomics data is commonly analyzed by PLS-DA and OPLS-DA models. This can be implemented in the R ropls package. Would it be possible to include these model types as options in SIMON? I am curious…
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Hi,
I am trying to model the biochemical interaction between a photosynthetic bacterium and another commonly found bacterium. However, mmetana fails to find a minimal growth medium. I have attached…
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Format name: < mzTab-M >
Short description: < A flexible tab-delimited reporting data standard file format for sharing quantitative mass spectrometry metabolomics/lipodomics results. It contains the …