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hello,
i just install PCGR and tried it with a vcf file i had laying around and this error was generated:
```
2017-11-28 22:09:37 [INFO] Number of block substitutions: 0
2017-11-28 22:09:37 [I…
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Hi SO,
Related to issues #378 and #379 where NCBI previously requested new terms or synonyms for INSDC terms, RefSeq is also using a few non-INSDC terms as misc_feature controlled vocabularies. Sin…
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I am looking into this on complex indel:
5 112174757 . GAAGA G,GGA 3843.12 PASS AC=1,1;AF=0.031,0.031;AN=32;BaseQRankSum=0.216;Clippi...
In sample 1 the gt is 0/1 (AAGA deletion) and in 6 the gt i…
kk988 updated
7 years ago
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(Thanks to @chaanim for reporting this issue.)
$ egrep -c '^8528200'$'\t' original-data/train/NCBItrainset_corpus.txt
22
$ egrep -c '^T' standoff/train/8528200.ann
11
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GO term: mutagenesis
GO id: GO:0006280
Definition: The process by which genetic material undergoes a detectable and heritable structural change. There are three categories of mutation: genome mutation…