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reported by @janakagithub
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- [ ] Add support for editing model templates
- [ ] Add support for mapping model templates to improved KEGG maps
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Making a ticket for @dmachi .
I'm not able to query for square brackets. Users want to be able to search for strings with compartments such as "h2[e]".
https://www.patricbrc.org/api/model_reaction…
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I have followed the instructions in creating the ModelSEEDDatabase variable as shown below;
thomas@Kiwi:~/PyFBA$ echo $ModelSEEDDatabase
/home/thomas/PyFBA/ModelSEEDDatabase
However when I test…
thh32 updated
3 years ago
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How do we want to group functions into modules?
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I successfully installed the ModelSEED repository using Paul's install script, but when I ran a git pull just now, I find that I need yet another Perl module in my system. This is fine for me to hand…
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Currently we don't have option to do gene KOs in FBA (only reaction KOs).
The implementation of reactions KOs with the search looks pretty neat, an exact same field for gene KOs would be ideal.
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I used to be able to run a MS command, without arguments, and it would tell me what the list of possible arguments are. It doesn't do this anymore.