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I am not sure how to write this example according to the structure. Would like to see some completed examples
Completion
- [x] Provide Montana an export from NCBI of metadata records that includ…
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Tbl2asn is a command-line program that automates the creation of sequence records for submission to GenBank. It uses many of the same functions as Sequin but is driven generally by data files. Tbl2asn…
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**Submitter Name and ORCiD**
Amy Zimmerman
**Submission ID**
1d87912e-9c22-4717-acf3-483a9335e770
**Have data already been generated for your study?**
No
**PI Name and ORCiD**
Amy Zimmerm…
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Submitter: Izabel
Submission ID: 7f29bd0b-4616-40d3-aac7-24e450f9f5dc
Have data already been generated for your study? : No
PI: Sarah Leichty
Status: Submitted Pending Review
GOLD Study ID:
NCBI…
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When filling in a form perhaps auto-collapse each element as it is completed to reduce visual clutter.
See example below. Here, we have already filled in NCBI Submission Description, BioSample Sample…
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We have this sequence in our ITS1 database: https://ncbi.nlm.nih.gov/nuccore/EF437222
That was a direct submission in 2007 from Australia, which listed the species as ``Phytophthora sp. Kunnunara``…
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Using free-text entry for the Sequencing Platform field (instrument_model in the submission.xml file) has generated NCBI processing issues in previous submissions. For example, entering "Illumina HiSe…
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In the `/note="authority:` field.
For example, https://www.ncbi.nlm.nih.gov/nuccore/1996759179
The original submission has `/note="authority: Pteris inaequalis (Fee) Jenman"`, which is a valid n…
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- [ ] check the runinfo to make sure the sample can be combined (i.e. same pairedness, insert size, read length)
- [ ] make sure we don't process the same file twice
- [ ] concatenate output file…