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Hi there,
I've managed to run
1. [import_ome_zarr](https://github.com/fractal-analytics-platform/fractal-tasks-core/blob/main/fractal_tasks_core/tasks/import_ome_zarr.py)
2. [drop_t](https://gith…
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Context: We were discussing OME-NGFF usages recently with @tischi and I noticed we were going in somewhat separate directions on this topic. I’d like to start the broader discussion to see where the O…
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"For a lab that has a lot of data, is there any way to transition gradually to NGFF"
- Run a service that exposes NGFF (e.g., OMERO)
- Pre-process data to "look like" NGFF ([kerchunk](https://gith…
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I'm planning on testing the [Sierra Wireless EM7565 4G LTE modem](https://amzn.to/3nKDnBe) soon; perhaps using Waveshare's 'Dual Gigabit Ethernet 5G/4G Mini-Computer' board (see #367).
TODO: Image …
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Dear all,
Could you tell me please where can one get some sample NGFF OME Zarr 3D volume data (just space dimensions, volumetric data, no time and no channel, but WITH labels)? Possibly, latest ver…
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I think we should add an extra tab "example data" (or so) to https://ngff.openmicroscopy.org/latest/#history and list the available example data for all versions there. I know that this exists for 0.1…
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Hi @tlambert03 , Hi @GenevieveBuckley ,
I just tried to use your napari-s3zarr package and I'm not sure how I should use it.
At EPFL we have our own S3 storage, where I dropped a zarr.
I have…
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### Your idea
Looking at https://bids.neuroimaging.io/bep031 there seems to be no mentioning of "precomputed" file format heavily used by various groups for EM data and supported by a wide range of s…
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When processing iSIM + BF data, I have found the need for a function to rename channel names. So far, since I have had to do a crop, I rename the channels there, but it would be nice to have a CLI fun…
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The image specification (`multiscales`) must define the origin, either w.r.t. pixel center or corner.
@lassoan summarized this well in https://github.com/ome/ngff/pull/85#issuecomment-1026030204:
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