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**Describe the issue**:
**Minimal Complete Verifiable Example**:
```python
# Put your MCVE code here
```
**Anything else we need to know?**:
**Environment**:
- Dask version:'2023.…
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I was trying to use Bioformats reader but I getting the following error:
reader = pims.bioformats.BioformatsReader(file)
File "C:\ProgramData\Anaconda3\lib\site-packages\pims\bioformats.py…
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Hello, I am encountering an error when I try and open any .avi file. I have seen similar issues on other forums but none appear to be resolved. For context, I have the most updated version of pims and…
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@nkeim @caspervdw @tacaswell:
I'm at SciPy 2015 working next to @stefanv. He would like me to refactor scikit-image's `ImageCollection` to behave like pims objects, backed by `SliceableIterable`. Aft…
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I found myself reaching for an `imsave` function to compliment `imread`. Presumably this would have similar semantics, and would effectively map over the `skimage.io.imsave` function, or something el…
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#### Expected Behavior
See below - the handle to a video file should not start returning zeros. The video file we're using with this is here:
https://caiman.flatironinstitute.org/~neuro/caiman…
pgunn updated
8 months ago
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Example code
```
import pims
image = pims.bioformats.BioformatsReader(somefilename)
```
And error messages that spit out
```
UserWarning: loci_tools.jar not found, downloading
warn('loci…
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Short summary of an email discussion: it was proposed to replace our lazy `FramesSequence` with dask.
I actually tried to combine dask with PIMS a while ago. Back then I concluded that `dask.Array`…
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I'm loading an image sequence using `pims.open` and then process each frame in this image sequence using a pipeline. All the processed frames then have a `frame_no` of 0, which seems to mess up tracki…
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I am trying to use jupyterlab-lsp with our jupyterhub at https://pims.syzygy.ca, but the extension gets stuck at "connecting..." in the statusbar and it says my notebook is not connected when clicking…