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I downloaded the planemo/interave docker image yesterday and nginx was crashing with "unknown directive upload_store". somehow it upgraded to 16.04.4 from archive.ubuntu.com
apt-cache policy nginx-…
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I'm trying to use the `simulate-travis.py` script, but can't get it to work.
It complains about missing `ruamel_yaml` and `conda.fetch` python modules.
I thought running this would fix it:
`./simul…
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Ordered by importance (by Martin)
## Should have
## Nice to have
- [ ] link to the galaxy log on the desktop of the virtual machine. (https://github.com/galaxyproject/planemo-machine/blob/master/roles…
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What do you think about putting a couple more scripts in here for better reference?
Ping @jmchilton @bgruening @afgane
I'm thinking of
- https://github.com/galaxyproject/ansible-galaxy-extras/blob/…
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Codebox is found on localhost:8010/ide/ but not localhost:8010/ide.
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```
ubuntu@packer-virtualbox-iso-1466017992:~/Desktop/tools$ ls
2.fasta 2.fastq bwa seqtk_seq.xml test-data tool_test_output.html tool_test_output.json
ubuntu@packer-virtualbox-iso-1466017992:~/…
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Hello ansible-galaxy-extras developers!
I am building a "flavor" of galaxy, working off of the great work of @bgruening and for our purposes, we want SFTP instead of FTP. I've introduced a PR (#83) w…
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If a tool creates and uses a conda environment that contains `python`, and a default `samtools` installation is not specified, the set metadata process will fail causing a tool failure.
What appears …
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Today I have been to @nekrut 's class where he used planemo-machine to teach students how to wrap tools for Galaxy. Some notes:
- Reorder the appliance list. Ova first? That is the best choice for a b…
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I am trying to run basic vagrant planemo-machine following http://planemo.readthedocs.org/en/latest/appliance.html#launching-the-appliance-vagrant
The Galaxy at http://localhost:8010/ is up (as well …