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_Recommendation:_ Accept If Certain Minor Revisions Are Made
_Comments:_
> I think the paper is great, but I would love for them to make it even better. This should be strongly encouraged. This shou…
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Reviewer `#3` (Remarks to the Author):
In Table 6, why are the computational domains chosen as cubics for all proteins for APBS? It is unfair for APBS in terms of efficiency.
In Table 7, solvat…
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Dear Mikael,
In the [MixedPoisson.py](https://github.com/spectralDNS/shenfun/blob/4faa1fbd364380dd52ff0bbce88f54e8d42bce08/demo/MixedPoisson.py#L1), I have two questions:
1 . How to modify it to …
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While we ask you to address all of the points raised, the following points need to be substantially worked on:
- [x] Consider the missing references pointed out by Referees 2 and 3 (see below).
- …
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Hi Mikael.
Based on shenfun, I have been able to implement a fairly efficient solver for two-dimensional decaying turbulence in a doubly-periodic domain which I eventually plan to use for part of m…
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@jstac @thomassargent30 @ChrisRackauckas
Starting with the python version as a reference: https://python.quantecon.org/sir_model.html
My thought is that there could be two lectures here:
- `M…
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I went through and trialed the code and found an error:
```
// For the Poisson equation the divergence of the guidance field is necessary.
cv::Mat vxx, vyy;
cv::Mat kernelx = (cv…
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## Background
There are currently five implementations of linearised bases in `Gridap`: the linear bases on the **refined** mesh, the **macro**-element bases lately implemented by @JordiManyer, the *…
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I can't seem to figure out how I can construct a `FieldMatrix` if I have in hand the matrix (or sparsematrix) versions of operator `A`. Is there a way to do that?
cc @Elise-palethorpe
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**Note update**:
statsmodels supports now all scipy optimizers through the scipy.optimize minimize function. The list below has not been updated. Several scipy optimizers (especially bfgs) have chan…