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Hi,
thank you for your great work !
I've successfully installed RFAA and run an example with 4DFR and MTX ligand.
But with Protein/Nucleic acid complex, i've this error message:
[...]
Running HHb…
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Hello, I encountered an issue as described in the title.
Building Spectral Library using DIA-NN v1.9.1
I created a spectral library using DIA-NN 1.9.1 with the following parameters. The output f…
Mnago updated
3 months ago
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Hello,
I have a problem running the following command : `m2m recon -g rocks -o rocks_m2m -c 16`
Here is the error message :
```
######### Running metabolic network reconstruction with Pathway T…
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Hi,
I followed the readme to install the DiffDock-L as follows:
conda env create --file environment.yml
conda activate diffdock
However, when I tried running the "interface" python I faced the…
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Hi Vadim,
I just wondered about the following command description in your docs, which I suspect can possibly be misleading:
_**--relaxed-prot-inf** instructs DIA-NN to use a very heuristical pro…
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Hi! Thank you for this amazing tool, also for the easy installation! I was wondering if there is any easy way of generating more than 5 models per case, besides looping over the execution of run_infer…
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Error executing job with overrides: []
Traceback (most recent call last):
File "/Data/RoseTTAFold2NA/RoseTTAFold-All-Atom-2/RoseTTAFold-All-Atom/rf2aa/run_inference.py", line 206, in main
run…
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Hello and congrats again to the Baker lab for the well-deserved Nobel Prize!
I'm trying to achieve the functionality of RFDiffusion+ProteinMPNN with Protein Generator. I have tested on three system…
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您好，我想要使用此模型来完成个人课程实践作业，鉴于示例输入数据是基于BIOS充分结构化的，而我目前只有前期识别并聚类的术语，在此情况下能否直接使用您的模型提取关系，或者需要做哪些预处理工作？如能点拨，不胜感激！
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I executed the following command with an added "-p" option.
python run_single_protein_inference.py ./data/1qg8_cleaned.pdb ./data/1qg8_input.csv --savings_per_complex 40 --inference_steps 20 --header…