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https://mp.weixin.qq.com/s/hd_7PMy0mwmMReloo6Z47w
ixxmu updated
2 years ago
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Hi! I am using a Mac (BigSur) for running VMD. I ran 1us simulation in Desmond on a Linux box (copied output on Mac) and wanted to run PCA analysis. In VMD when I load the molecule (and the trajectori…
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We need to double-check the methods section, including disambiguating the various labware, "deepwell" or not.
@daneckaw has agreed to do this by next week (11th June). Then we should kick back over…
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Meeting note on Feb 26. 2021
1. DNA footprinting pipeline(shared by Shannon): http://www.regulatory-genomics.org/hint/introduction/
2. DNA footprinting paper (shared by Shannon): https://genomebiolo…
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## Bi-weekly meeting memo
0. Files that Shannon will share to Tao
- ATAC-seq datasets: fastq
- variant dataset: vcf
- packages: R Bioconductor, ChIPPeakAnno, ChipSeerker
1. make the footprint f…
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https://mp.weixin.qq.com/s/4-SUn7JGbnWlR4N5ekebtQ
ixxmu updated
3 years ago
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## New lineage proposal
by Michael K. Edwards
### Description
Sub-lineage of: B.1.617.2
Earliest sequence: collected 2020-11-21
Most recent sequence: Now.
Countries circulating: Global.
I …
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https://mp.weixin.qq.com/s/BqpzGZQsquwM7T73HEXDOg
ixxmu updated
3 years ago
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Hi. It looks like I am running into issues with DNA motif analysis and specifically when I use the function add motifs(). I would really appreciate some feedback or help on this issue. Thank you f…
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Before we start updating DRAO, we need to update the member ontologies and ensure there are no resulting conflicts. This ticket covers that update.