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**Is your feature request related to a problem? Please describe.**
Seqr displays gnomad SV allele frequency, but given the small SV dataset it is hard to interpret allele count.
**Describe the so…
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It is possible to add support for clojure/scala/groovy by adding a simple jar dependency. I am considering contributing in one of these languages. I think development would be a bit faster for me and …
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What is the best way to draw pedigrees?
### Write our own pedigree hierarchy and render functions from scratch
**Pros**
Fine control over all aspects
Can easily reuse component in future apps
C…
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**Is your feature request related to a problem? Please describe.**
The local development server does not work with more recent versions of node due to [this issue](https://stackoverflow.com/questions…
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Hi
I am running starseqr on my samples and stuck in error.
starseqr.py -1 sample_1.fastq.gz -2 sample_2.fastq.gz -m 1 -p starseqr_test -t 50 -i STAR_FUSION_LIB/ref_genome.fa.star.idx/ -g genomic.g…
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┆Issue is synchronized with this [Jira Story](https://ucsc-cgl.atlassian.net/browse/ANVIL-649)
┆containerName: AnVIL
┆Issue Number: ANVIL-649
┆Sprint: Backlog
┆Issue Type: Story
kozbo updated
3 years ago
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as discussed in the Baltimore meeting, GeneMatcher, PhenomeCentral, and Decipher all have case deposition APIs and MyGene2 is planning to create one. If we can agree upon a spec for what a common MME …
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Hi, it seems that STAR-SEQR might no longer be useable with most recent versions of its dependencies. I have installed it via bioconda as per the following website, and keep running into roadblocks wi…
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As discussed offline, our group has been trying to assess how to replicate/port our existing workflows to seqr.
We've found that the data that seqr allows us to enter about a given project/individ…
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Would it be possible to implement a feature that allows a seqr user to search for variants that are in at least one of many gene lists. The current interface allows searching for variants in only one …