ExpressionAnalysis STAR-SEQR issues

ExpressionAnalysis / STAR-SEQR

RNA Fusion Detection and Quantification

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issues

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STAR alignment not working

#32 anoronh4 opened 1 year ago
1
[STAR-SEQR; Docker] ERROR - Exception: ('too many values to unpack', u'occurred at index **')

#31 ReWeda opened 1 year ago
0
Using bam alignment

#30 arichards2564 opened 2 years ago
0
Running STAR-SEQR with only star alignment outputs

#29 GACGAMA opened 2 years ago
0
nested renamer is not supported

#28 Ajeet1699 opened 3 years ago
2
ERROR - b'\nBAMoutput.cpp:27:BAMoutput: exiting because of *OUTPUT FILE* error: could not create output file

#27 kate-simonova opened 3 years ago
0
IntervalTree error: version compatibility

#26 kskuchin opened 3 years ago
0
read Chimeric.out.junction ERROR，about pandas

#25 ruizgo opened 3 years ago
1
Error: salmon quant failed

#24 yeswzc closed 4 years ago
1
Runtime far exceeding Wiki-suggested runtime

#23 dstueckm opened 4 years ago
2
exact tool version .yaml available?

#22 mapostolides opened 4 years ago
1
STAR-SEQR for single end reads

#21 suhana13 opened 4 years ago
0
IOERRROR in docker

#20 medcelerate opened 4 years ago
1
how to cite in literature?

#19 brianjohnhaas opened 5 years ago
0
Error: no SAMPLE.Chimeric.out.junction file

#18 personalis opened 6 years ago
3
networkx version incompatibility

#17 jasper1918 opened 6 years ago
0
`-n` argument used in example appears to be deprecated

#16 williamrowell closed 6 years ago
1
installation instructions for biobambam outdated

#15 williamrowell closed 6 years ago
2
Issue with multi-filtering

#14 jasper1918 closed 6 years ago
1
gtf location

#13 jasper1918 closed 6 years ago
1
Salmon quant

#12 jasper1918 opened 6 years ago
2
Potential future issue

#11 jasper1918 opened 7 years ago
1
Dev 5.0.0 Branch PR

#10 jasper1918 closed 7 years ago
0
Updates to docker

#9 jasper1918 closed 7 years ago
0
PR for 0.4.0

#8 jasper1918 closed 7 years ago
0
Dev0.3.0

#7 jasper1918 closed 7 years ago
0
Dev

#6 jasper1918 closed 7 years ago
0
Fusion Quantification

#5 jasper1918 closed 7 years ago
1
Primer design

#4 jasper1918 closed 7 years ago
2
homology

#3 jasper1918 closed 7 years ago
1
Probabilistic module

#2 jasper1918 closed 7 years ago
1
Use known reads more effectively

#1 jasper1918 closed 7 years ago
1