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We need a parser that can take as it's input a text file with bash commands and create a Dask HighLevelGraph.
Jobs are normally grouped together by analysis type (QC, filter, preprocess, align) and…
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### Describe the bug
A clear and concise description of what the bug is.
Trying to run docker container for data preprocessing , its MLPerf Cosmoflow NVIDIA implementation , below is the link
The…
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The `provisioning_parameters.json` needs to be valid json or the cluster creation will fail, for example the following json is missing the `partition_name` value:
```json
{
"version": "1.0.0",
…
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Hi Dr. Bury,
I stumbled across this GitHub repository and found the analysis and results you present most exciting!
Thanks for sharing this excellent research in your public repository! While …
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Embed the SELinux security context into the credential metadata. This will benefit resource managers (e.g., [Flux](https://github.com/flux-framework/flux-security/issues/95) and [Slurm](https://bugs.s…
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# Description
The current `smart teardown --dragon` does not clean up the `/dev/shmem` segments.
# How to reproduce
Interrupt a running Dragon-based example which reserved shared memory segments and …
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I am trying to train models on multiple nodes with SLURM as a workload manager. The Issue seems to be with the Python virtual environment not available to all nodes. Please find more details below. …
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## New feature
The HPC that I am using has a SLURM workload manager that does not support Nextflow's memory directive.
Instead, memory per CPU must be specified in its sbatch file:
```
#SBATCH -…
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Hello, I'm having this problem already for a while when running emapper.py using the hmmer search.
I'm running it on a cluster which uses the SLURM workload manager. So far it works perfectly well …
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### Proposal
Add support for training using IsaacLab on clusters that use PBS job scheduler.
### Motivation
The current example for training on a cluster assumes a **SLURM (Simple Linux Utili…