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Hi All, first wanted to thank you for developing this tool. I work in a lab that currently focuses on pathogenic species of bacteria that are associated with the microbiome of various tumors and are i…
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Hi, i am trying to run Control FREEC on a virtual machine on my PC. Every time after starting reading the samples, it pumps out the error says unable to read bam files. I wonder if you have any ideas …
Lyn16 updated
3 years ago
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## Issue description
This issue has for goal to document inference on images with dimensions different from the ones used during training.
## 2D UNet
The 2D model trained for spinal cord segmenta…
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Motivated by the QuPath workflow and the usage of https://github.com/glencoesoftware/ome-omero-roitool . This tool imports MapAnnotations on ROIs (via an export script in QuPath and then import as OME…
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### Idea Contribution
- [X] I have read all the feature request issues.
- [X] I'm interested in working on this issue
- [X] I'm part of GSSOC organization
### Explain feature request
This tutorial …
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### Is there an existing module for this?
- [X] I have searched for the existing module
### Is there an open PR for this?
- [X] I have searched for existing PRs
### Is there an open issue …
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https://doi.org/10.1101/242818 https://www.biorxiv.org/content/early/2018/01/04/242818
> Breast cancer remains the most common type of cancer and the leading cause of cancer-induced mortality among…
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Hi,
Thank you for your improvment for tumor-only analysis. Could you give us more informations about the method used please ?
Bests,
Elodie
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**Abstract**
An open-source project for serving deep learning-based solutions in clinical scenarios. Lately, deep learning and its application in computer vision have proven to be highly beneficial f…
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Add scripts for user to determine the cuf-off of MSI-H and MSS/MSI-L ?