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Hello,
I am very interested in using htmd to run some adaptive sampling simulations.
However, the examples I have seen on adaptive sampling seem to deal only with ACEMD on a local GPU cluster.
I wo…
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Similarly method to the exciting interaction detection
method MI:0404 'comigration in non denaturing gel
electrophoresis'. As the usage of 2d gels allows to
explore bigger complexes and involves diffe…
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Similarly method to the exciting interaction detection
method MI:0404 'comigration in non denaturing gel
electrophoresis'. As the usage of 2d gels allows to
explore bigger complexes and involves diffe…
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# Solvation models
Electrostatic and solvation models can be roughly divided into two classes (Warshel, 2006; Roux 1999; Ren, 2012) explicit solvent models that treat the solvent in atomic detail and…
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Hi,
I am trying to create a compound node and move some elements to that compound node by using eles.move( ) function. I observed that when width or height attribute is set for nodes, eles.move( ) …
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**lib/posthtml.js**
``` js
'use strict';
var parser = require('posthtml-parser');
var render = require('posthtml-render');
// auto-load plugins
var load = require('posthtml-load-plugins')
var api =…
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Friends,
This issue is in reference to the discussion in MDAnalysis user forum (refer to the following link)
https://groups.google.com/forum/#!topic/mdnalysis-discussion/V6yicCbu70Q
I used density_fr…
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As a follow up to the RFC about handling of indicators https://github.com/inveniosoftware/dojson/issues/19, I would like to raise my concerns about the order of subfields. The order of subfields are i…
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Hello,
This is a kind of simple standard protocol. The backbone of the script is basically built by OpenMM script builder. The system has a small protein in water box. Interestingly, temperature is st…
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Several things:
\- the defs of the terms under meiosis are uninformative and could
do with improvement.
\- is 'entry into meiosis ; GO:0042061' really an example of
regulation of meiosis?
\- acco…