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The PDBML reader should be picking up the equivalent of MODRES and reconstructing the PDB style MODRES records in the WPDB->header stringlist
I am assuming that this doesn't work at the moment through…
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Asked by BM14: when changing prefix in 'Data collection', for example, would be great if prefix could automatically change for 'Characterisation' or 'Helical' etc.
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Try
```
pdb2pir -s 1yqv.xml
```
Output for the light chain is
```
mdIVLTQSPAIMSASPGEKVTMTCSASSSV
```
but the sequence is the same in the SEQRES and ATOM records (Met Asp Ile)
I believe th…
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Hi GO editors,
I have seen that GO has a class for "cytokine secretion". A subclass of that is "chemokine secretion".
For logical definitions in HPO I would like to refer to the GO classes "interfer…
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Moved from:
[ 1325781 ] term name changes - development terms
https://sourceforge.net/tracker/index.php?
func=detail&aid=1325781&group_id=36855&atid=440764
There is no need to read the previous item.…
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I need some terms to describe hair development in
Drosophila.
under auditory hair cell differentiation ; GO:0042491,
we have:
hair cell fate commitment ; GO:0009912
hair cell fate determination ; GO…
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Hi developer,
wonder how to generate figure 1 in your paper? Any script to do that? Thanks!
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We have nearly migrated all of our cytokinesis annotations under the new mitotic cytokinesis terms.
A few outstanding things:
1. GO:0032186 cellular bud neck septin ring organization
is a 'mitosis' …
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The current definition of sperm cell (A haploid male reproductive cell (usually two in number); during double fertilization, one fuses with the female gamete (egg cell) to produce a zygote while anoth…
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```
What steps will reproduce the problem?
1. Compiling the code on gcc 4.5.2 produces numerous formatting warnings.
2. Running cd-hit always shows a CPU time of 0 at the end of the output.
I've fixe…