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```
### Interactive tours
Interactive Tours are available for Galaxy and HiCExplorer. To run the tours please on top panel go to **Help→Interactive Tours** and click on one of the tours prefixed **H…
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@skchronicles
**Description of bug:**
Unlike all of the other file types used in our analyses which follow the information in the .yaml line `fn_clean_sample_names: False`, deeptools fingerprint plo…
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I am getting standard output error running this function on the last version. It is working on version 1.8 though with python 2.7.14. Here is the error:
File "/package/anaconda3/envs/HiCExplorer-…
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Hi,
I was wondering if you could be so kind as to help me with a problem. I freshly installed deeptools and pygenometracks, but I found an error from matplotlib when trying to use the second:
#run…
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Hello,
I ran hicPCA from the develop branch (commit 6c4210a) on multiple Hi-C matrices from the Drosophila genome (dm6), including already published ones, and I got really low PCA values (in the -0…
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https://hicexplorer.readthedocs.io/en/documentation/index.html
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May I ask how the code differentiate between obs = 0 and exp =0 while computing Libermann obs/exp. As far as I understood obs/exp has been set to zero when denominator is 0 (exp = 0) and of course it…
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Hi,
Is the Lieberman format described in hicExport.py and elsewhere the .hic format (output of the Lieberman lab's Juicer software)?
Thank you, and thanks for the great software.
-Kris
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Hello Team,
We are trying to analysis over Hi-C data with HiCExplorer, we had finished with few steps like(hicBuildMatrix , hicCorrectMatrix , hicPlotMatrix , hicFindTADs , hicPlotTADs )and need s…
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We're occasionally seeing issue where numpy is trying to create 100+ of its own threads for each fork of a number of processes, resulting in using all of the available processes for users and SIGABRT …